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Old 05-22-2018, 07:11 AM   #1
Junior Member
Location: Nottingham

Join Date: Nov 2015
Posts: 6
Default FastQC results for 16s reads


I have some FastQC results I have generated from Illumina 16s sequences. I have attached an example of the results for one of the demultiplexed fastq files, but they all look simillar.

I think that the per base quality score looks ok but I am not sure about the other statistics. I have only worked with WGS data before and I haven't been able to find any information on if these are normal.

Any information/links to resources on if these look ok would be really helpful.

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