Quote:
Originally Posted by rs705
Can you be a little more specific about what you want to do with RNA-Seq? There are a couple of software packages that are available, depending on what your interests are.
|
At the moment I'm just checking out whats available so I'd be interested in any packages that process RNA data. I'm looking for a package that attributes reads to a gene then calculates statistics like RPKM for the gene and uses read clustering to identify novel exons etc. Like I said, I'm more interested in knowing what is available for RNAseq than the specific function.