View Single Post
Old 05-08-2014, 12:07 PM   #1
shyam_la
Member
 
Location: California

Join Date: Mar 2012
Posts: 97
Exclamation Virmid - SNV mutation caller

Anyone here have any experience using Virmid? I have some exome seq data that I want to use it on but on first attempt with default parameters I get this error:

Exception in thread "main" java.lang.StringIndexOutOfBoundsException: String ind
ex out of range: -1
at java.lang.String.substring(Unknown Source)
at virmid.Param.reportFile(Param.java:225)
at virmid.Virmid.main(Virmid.java:112)

Any ideas?
shyam_la is offline   Reply With Quote