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Old 10-06-2009, 10:31 PM   #3
edge
Senior Member
 
Location: China

Join Date: Sep 2009
Posts: 199
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Hi,

Thanks for your info.
Do you have any idea about N90?
That means the N50 contig size, I just choose and calculate the smallest contig S in the sorted list of all contigs?
Thanks again for your explanation

Quote:
Originally Posted by sklages View Post
The N50 contig size is a weighted median value and defined as
the length of the smallest contig S in the sorted list of all
contigs where the cumulative length from the largest contig to
contig S is at least 50% of the total length.

cheers,
Sven
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