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Old 05-15-2014, 07:41 AM   #18
jpummil
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Location: Fayetteville, AR

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In the following link, there is an explanation of evaluating kmer coverage using the stats.txt file generated by your first assembly:

http://en.wikibooks.org/wiki/Next_Ge...g_(NGS)/Velvet

Of course, I'm not certain how good the initial assembly has to be for this to be accurate.
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