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Old 05-24-2016, 11:24 AM   #5
Junior Member
Location: New England

Join Date: Jan 2016
Posts: 3

Hi Michael Ante,
I'm pretty new to these programs. I ran cufflinks on a few samples - how do I interpret the resulting reports? Also, if the files are indexed with different alignments (which I now suspect they are), is there an easy way to re-align them properly?
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