hello,
am running cuffdiff between two single end reads and even thought it runs fine am getting a message as follows:
using default gaussian distribution due to insufficient paired-end reads in open ranges.it is recommended that correct parameters be provided(frag-len-mean and frag-len-std-dev)
when they say fragment length ,do they mean average read length?
thanks,
joji
am running cuffdiff between two single end reads and even thought it runs fine am getting a message as follows:
using default gaussian distribution due to insufficient paired-end reads in open ranges.it is recommended that correct parameters be provided(frag-len-mean and frag-len-std-dev)
when they say fragment length ,do they mean average read length?
thanks,
joji
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