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Old 08-28-2014, 09:34 AM   #1
polarfire
Junior Member
 
Location: Auburn, AL

Join Date: Aug 2014
Posts: 2
Default Script to count parsimony informative sites

I have hundreds of alignments, and I am curious if there is a script or tool out there that can simply count the number of parsimony informative sites in any given alignment?

I know you can get this information by loading it into a phylogenetics program (e.g. PAUP or MrBayes), but if anyone knows of a script that can do this so it can be automated and done quickly I'd appreciate it!
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