View Single Post
Old 11-01-2012, 09:11 AM   #2
Senior Member
Location: Ohio

Join Date: Jan 2010
Posts: 144

NCBI has a 16S database with all named type strains that you can BLAST against, though I would think if you got a high identity match to that the classifier should be able to predict it.

Another approach would be to identify full length sequences corresponding to your OTUs, then make trees with them and named species and infer the taxonomy from that.
cliffbeall is offline   Reply With Quote