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Old 03-13-2013, 10:49 AM   #8
severin
Genome Informatics Facility
 
Location: Iowa @isugif

Join Date: Sep 2009
Posts: 105
Default lots of searching

Hi again.

I was wondering if there is a way to restart a search if the run is terminated prematurely.

I am running Ray meta with all genomes from ncbi. I have a sample that contains multiple eukaryotic and microbial transcriptomes of unknown origin.
I have 256 cores on this and it takes about 3 hours to assemble the genome but it takes more than 21 hours to load the genomes I want to search. I get the impression that checkpoints do not include the ray meta analysis. is it possible that this could be included in the checkpoints?


Andrew
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