Thread: Gatk vqsr
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Old 02-14-2014, 04:11 AM   #1
variadevang
Junior Member
 
Location: india

Join Date: Jun 2012
Posts: 7
Unhappy Gatk vqsr

What does VQSR actually do? It improves the score? It filters the variants? or exactly what?
Is it an alternative for VariantFiltering based on hard values? i desperately need help on this.
p.s. i have gone through pdf's, tutorials, the complete GATK website but have failed to understand the concept.

IF POSSIBLE PLEASE EXPLAIN IN A BIT BRIEF
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