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Old 04-04-2014, 12:28 AM   #2
TiborNagy
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Location: Budapest

Join Date: Mar 2010
Posts: 329
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Trinity is an all-in-one tool. It can use reference to make a de-novo transcriptome and it has a module to annotate the results:
http://trinityrnaseq.sourceforge.net...d_trinity.html
http://trinotate.sourceforge.net/
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