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Old 03-29-2019, 07:44 AM   #667
aushev
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Location: Europe

Join Date: Nov 2009
Posts: 21
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I'm wondering if anyone tried to apply callvariants.sh to RNA-seq data. When I tried to use it with my bam file, it found about 140,000 variants - but all of them are homozygous which is obviously impossible. I guess I should play with the parameters somehow...
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