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Old 05-25-2009, 11:34 PM   #3
Location: Oslo, Norway

Join Date: Nov 2008
Posts: 415

And/or have newbler produce the 454ContigGraph.txt file which gives you average coverage per contig (not min/max). This can be done by setting the -g flag (note: this sets the minimum contig length to report from 100 bp to 1 bp...).
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