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Old 02-17-2014, 10:26 AM   #3
JackieBadger
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Location: Halifax, Nova Scotia

Join Date: Mar 2009
Posts: 381
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Or

grep xxx -c file.fastq

xxx being some string of characters only found in sequence identifiers

With MiSeq generated fastq an example would be

grep @M00 -c file.fastq

Last edited by JackieBadger; 02-17-2014 at 11:34 AM.
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