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Old 02-04-2020, 10:44 AM   #3
Location: Canada

Join Date: Sep 2013
Posts: 19

Originally Posted by microgirl123 View Post
Are you uploading to BaseSpace? If so, you just need to let the analysis finish up and then go in and fix your sample sheet and requeue the analysis under the "more" tab of the summary page. If you're not uploading to BaseSpace it's still possible to fix your sample sheet and re-analyze the data, just a bit more complicated.
No, I am not uploading to BaseSpace. I know re-analyzing data after Miseq run is complicated, as read1 and read2 do not contain barcode sequences.

I wonder whether correcting that index sequence in sample sheet before Miseq run would work. Does change of default index sequence lead to Miseq run or demultiplexing fail?
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