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Old 11-14-2011, 08:44 AM   #17
selen
Junior Member
 
Location: Ohio

Join Date: Dec 2010
Posts: 9
Default A single bam file as alignment output

Dear Semyon,

Is there a way to get alignments in a single file per sample in bam format as alignment output?

As far as I know we need an additional "configurebuild --targets sort bam " step to achieve it right now.

Thanks
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