SEQanswers - View Single Post - How to extract base coverage from bam/bai-files

yl01 · 01-27-2014, 01:07 PM

Igvtools (which is a command line tools associated with IGV) count can do this task easily. It produces a text file in wig format. However it may not easy to open it in Excel as desired.

01-27-2014, 01:07 PM	#10
yl01 Member Location: Germany Join Date: Aug 2012 Posts: 25	Igvtools (which is a command line tools associated with IGV) count can do this task easily. It produces a text file in wig format. However it may not easy to open it in Excel as desired.