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Old 12-12-2013, 05:42 AM   #4
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Location: Stuttgart, Germany

Join Date: Apr 2010
Posts: 192

i have installed blast2.2.28+ there you need to use the 'makeblastdb' script to generate a new blast database. Actually there is no formatdb script. There is one named 'blast_formatter' which is to reformat a given onine blast output. Try generating your db with 'makeblastdb'.
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