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Old 08-14-2013, 01:54 AM   #2
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Location: sub-surface moon base

Join Date: Apr 2013
Posts: 372

Includes archaea. You could also make bacteria sub db from NR..

1.;Organism:exp] > send to: file: gi list
2. blastdb_aliastool -gilist yourList.txt -db nr -out BacteriaOfNr -title BacteriaOfNr -dbtype prot

Another alternative would be to learn to use eutils..

Last edited by rhinoceros; 08-14-2013 at 02:05 AM.
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