I am going to sequence two different subtypes of tumors using paireend chemistry on SOLiD. My aim is to study differential expression, alternative isoforms, fusion genes and long non coding RNAs.
I want to know what tools are best suited to analyse all the above (eg. mapping tools, tools to find fusion genes etc.). I an not interested in using bioscope/lifescope.
I would be happy if any of the members able to give information about the sources where RNAseq analysis was explained in a way understandable to the naive'
I want to know what tools are best suited to analyse all the above (eg. mapping tools, tools to find fusion genes etc.). I an not interested in using bioscope/lifescope.
I would be happy if any of the members able to give information about the sources where RNAseq analysis was explained in a way understandable to the naive'
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