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Old 05-28-2014, 08:53 AM   #52
Brian Bushnell
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Location: Walnut Creek, CA

Join Date: Jan 2014
Posts: 2,707


In Windows, you can handle that with quotes, e.g. ref="/a/path with spaces/x.fa"

In Linux... I don't know how to do it easily. Perhaps the easiest way would be to make a symlink that doesn't have any spaces. Alternatively, as in this article, you could export the path as an environment variable.

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