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Old 12-02-2014, 05:05 PM   #150
Brian Bushnell
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Location: Walnut Creek, CA

Join Date: Jan 2014
Posts: 2,707

Originally Posted by sdriscoll View Post
Brian, do you mind explaining how the 50bp match, 20k intron, 50bp match ends up with a rough score of 8841? And in terms of the above examples that means it would have a final score ratio of about 0.887, right? thanks.
Oh, right - yes, the score ratio would correspond to 8841/9970 = 0.887, if 8841 was in fact the read's raw score.
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