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Old 08-13-2019, 03:55 PM   #2
GenoMax
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Location: East Coast USA

Join Date: Feb 2008
Posts: 7,054
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I suggest you give "tadpole.sh" from BBMap suite a try. It works well with small genomes. Tadpole guide is here.

If you are looking to make velvet work then this is a moot point.

Are you letting velvet go through entire range of k-mers?
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