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Old 02-08-2013, 06:35 PM   #1
apredeus
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Location: Bioinformatics Institute, SPb

Join Date: Jul 2012
Posts: 151
Default ENCODE ChIP-seq Metrics (NSC,RSC)

Hello all,

I was wondering if there's a software package that calculates the metrics that are used by ENCODE project (described in http://genome.cshlp.org/content/22/9/1813 )

I'm interested in NSC, RSC and data for "cross-correlation - strand shift" plots.

Anybody else uses those for their experiments?

Thank you in advance.
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