View Single Post
Old 11-24-2017, 05:01 AM   #3
GenoMax
Senior Member
 
Location: East Coast USA

Join Date: Feb 2008
Posts: 6,961
Default

@cement_head: If there are no remaining adapters then all you lost is some time. For miseq datasets you would need less than 30 min to scan/trim data with bbduk.sh from BBMap. You can then be sure that there would be no extraneous sequences remaining in your data. Especially important if you were doing any de novo work.
GenoMax is offline   Reply With Quote