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Old 12-20-2016, 06:50 AM   #21
santiagorevale
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Location: UK

Join Date: Dec 2016
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Quote:
Originally Posted by Brian Bushnell View Post
OK, I'll make a note of that... there's nothing preventing paired file support, it's just simpler to write for interleaved files when there are stages involving splitting into lots of temp files. But I can probably add it without too much difficulty.
Hi Brian,

I was wondering if you have any plans for developing the above mentioned change in a short while (and if yes, when?), because I'm eager to implement Clumpify on our rawdata but I don't like the idea of having to go interleaved and then back. We deal daily with Tb of data and all our pipelines are set for twin paired-end files.

Also, where can I find what are the changes introduced in each implementation of BBtools?

Thank you very much for your effort!
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