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how to install GATK through terminal in ubuntu?
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The GATK distribution is a jar file, it should run if you have java installed. -
The information you are looking for can be found here: https://software.broadinstitute.org/...quickstart.phpComment
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Gatk
can i input .sam file to GATK in linux??Comment
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GATK is one of the best documented software in Bioinformatics, are you even making an effort to go to their webpage and reading tutorials or documentation?Last edited by vivek_; 01-25-2017, 05:35 AM.Comment
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But reading is hard and takes time, therefore it's easier to just ask people who volunteer online to help and waste their time instead.Originally posted by vivek_ View PostComment
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error while running
when ever i try to run "java -jar GeomeAnalysis.jar" its showing "unable to access jarfile GenomeAnalysisTK.jar" but when i use "java $GATK -h" gatk environment is coming..please help me in running the toolComment
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The sequencing world is rapidly changing due to declining costs, enhanced accuracies, and the advent of newer, cutting-edge instruments. Equally important to these developments are improvements in sequencing analysis, a process that converts vast amounts of raw data into a comprehensible and meaningful form. This complex task requires expertise and the right analysis tools. In this article, we highlight the progress and innovation in sequencing analysis by reviewing several of the...05-06-2024, 07:48 AM -
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