SEQanswers - View Single Post - command-line pathway enrichment test

sehrrot · 08-07-2014, 09:09 PM

Hi

I have been doing pathway analyses using Cytoscape Cluego but now I have many input files. Is there any command line tool for pathway enrichment test (e.g. KEGG, GO, REACTOME etc)?

Thanks
Chris

08-07-2014, 09:09 PM	#1
sehrrot Member Location: USA Join Date: Jul 2010 Posts: 58	command-line pathway enrichment test Hi I have been doing pathway analyses using Cytoscape Cluego but now I have many input files. Is there any command line tool for pathway enrichment test (e.g. KEGG, GO, REACTOME etc)? Thanks Chris