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Old 01-23-2012, 12:37 AM   #4
Junior Member
Location: Germany

Join Date: Dec 2011
Posts: 6

Thank you for your answers.

peromhc, since we received the libraries in a single file without too much information, i don't know the exact number of libraries. The insert sizes range from 100 to 500 with the majority between 200 and 400.
All reads were 101 bp long.
The average sequencing depth seems to be around 50. The size of the genome is estimated to be around 40 mbp. Our assembly contains around 30 mbp.

MadsAlbertsen, how do you get such a plot? What program/command do you use?
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