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Old 07-09-2014, 02:26 AM   #2
kopi-o
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Location: Stockholm, Sweden

Join Date: Feb 2008
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I believe that the PRICE assembler (http://derisilab.ucsf.edu/software/price/) is constructed for this use case. You might want to try it. I haven't had time to test it yet, but plan to apply it to a similar scenario where we want to "flesh out" an existing contig.
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