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Old 03-09-2011, 05:32 AM   #2
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Location: Boston

Join Date: Nov 2009
Posts: 224

I'd also really like to know what this does. I have some sequence data from PE reads with a range of fragment sizes. If some of the reads meet the criteria for the expected inner distance between mates to be <= 50 bp, but some do not, does anyone have an idea how this would affect mapping?
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