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  • use of BaseSpace app for outside data

    Hi All,

    Has anyone tried to import outside work into a project in BaseSpace and then use the Apps in BaseSpace to process the data, such as tophat?

    Thanks

    Wing

  • #2
    Yes, I have tried. Did not work as of about 6 months ago.

    Comment


    • #3
      Yes. What in particular did you want to know?

      Comment


      • #4
        I am just wondering if I can take a piggy-back of the APPs in BaseSpace for analysis of, say, RNA-Seq data, which were generated outside of BaseSpace.

        Thanks

        W

        Comment


        • #5
          Originally posted by wingtec View Post
          I am just wondering if I can take a piggy-back of the APPs in BaseSpace for analysis of, say, RNA-Seq data, which were generated outside of BaseSpace.

          Thanks

          W
          I have the same question....any answers?

          Comment


          • #6
            Seems like more work than it's worth IMO. Why not use Galaxy if that's what you're looking for?

            Comment

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