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Old 10-29-2010, 10:21 PM   #1
Jordy224
Junior Member
 
Location: VA,USA

Join Date: Feb 2009
Posts: 7
Default Identifying gene name synonyms

A quick question.
Using Entez database or AmiGO, How to you find all synonyms of a particular gene in other genomes without falling back on a sequence homology search.

For example. Gene psaB can also be annotated as ycf4.

In fact, I am attempting to identify protein clusters between my newly sequenced genome and the relatives using a script. So, I need to obtain a list of all synonyms.

Whats the best method, or software.
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