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Old 09-24-2012, 10:23 AM   #6
Location: New York

Join Date: Dec 2009
Posts: 17

Alex, did you ever find a solution to this? If so would you mind sharing? I have the exact some problem, and I am also a beginner. I used tblastn to compare my own de novo assembled contigs to a protein database. I would like to extract the full translated sequences that come up as hits, ideally from the blast results themselves. It would be very great to avoid doing the translations myself, and then finding the correct reading frame.
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