Thread: maq on a mac
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Old 08-09-2008, 01:00 PM   #2
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Location: SF Bay Area, CA, USA

Join Date: Oct 2007
Posts: 1,358

Hey there...I would suspect that the "FASTQ" file you have is really solexa's format that is off just a bit. There are some notes on the conversion here:

I think there is a script included that will do that change for you...otherwise someone else will have to jump in.
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