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Old 03-19-2014, 06:07 PM   #41
bigmw
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Location: US

Join Date: Aug 2013
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Again, that’s because in this pathway, node labelled “Gene A” includes gene(s) other than “Gene A” but with similar function. It is a summary of fold changes for all genes mapped to this node, should you be surprised that it is different from fold change of “Gene A” alone?
You may use node.sum argument to control the the node summary is calculated, mean, median, max etc.
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