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Old 10-25-2021, 05:28 AM   #3
Junior Member
Location: Sweden

Join Date: Oct 2021
Posts: 2

Yes, cores are available as I did run it in a computer cluster. That is not a problem I think.

Latest update: When I changed
rescuemismatches 1 to 2
. It started working but for a long time, 2 hours and the job is canceled due to the time limit that means I need more time to assign for this run with 20 cores (1 node). so far resulting files are:
22G Oct 25 13:42 2008-27-201.aligned.sam
120G Oct 25 13:42 2008-27-201.unaligned.sam
But I want a unique reads that should not be so much!
abubd is offline   Reply With Quote