Thread: annotations
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Old 01-18-2012, 11:14 PM   #3
Location: South Korea

Join Date: Feb 2011
Posts: 31


i got the reply from RAST team///i am pasting the reply below....

Unfortunately, the only type of promoter sites RAST can recognize
are Ribosomal Binding Sites. RAST cannot yet recognize any type of promoter site
other than the RBS.

Hence, mutations in the upstream region will not have any impact on RAST's
gene-calls or annotations unless they weaken the RBS site so much
that the correct START site fails to be found.
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