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Old 07-19-2010, 12:22 PM   #3
aguffanti
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Location: Milano, Italy

Join Date: Dec 2008
Posts: 29
Default miRNA mapping

Hi - I would use SHRiMP from M.Brudno's group to map SOLiD reads against miRNA db. It is slow but it does contain a 'miRNA' specific mode

Kind regards,

Alessandro
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