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Old 10-27-2020, 10:13 PM   #2
stallworth
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Location: Kyoto

Join Date: Mar 2019
Posts: 1
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Hi,

I'm not sure what you have now. But if you have a list of differentially expressed genes with their fold change, such as the results from edgeR or DESeq2 package, I think the package `clusterProfiler` is good for you to do GO/GESA/KEGG directly. You could find their detailed manual here -> http://yulab-smu.top/clusterProfiler-book/chapter1.html.

best
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