View Single Post
Old 04-08-2011, 12:55 PM   #1
flobpf
Member
 
Location: USA

Join Date: Apr 2010
Posts: 76
Default Newbler segmentation fault

I'm using Newbler x86_64 version to assemble my 454 reads on a cluster machine. When I try to use this command:
Code:
addRun -lib 3kb_PE project2 GE3Z0RR02.sff
I keep on getting an instantaneous Segmentation fault error. I also noticed a (core dump) message before segmentation fault. Wikipedia says you get this error when program tries to access memory it is not allowed to.

What is the solution, though? I'm not even sure if Newbler is trying to do that since the error is almost instantaneous (its certainly not going above allocated usage). I am confused by this error...please help. Any suggestion will be useful
flobpf is offline   Reply With Quote