Thread: DESeq
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Old 07-31-2013, 06:03 AM   #2
Devon Ryan
Location: Freiburg, Germany

Join Date: Jul 2011
Posts: 3,480

The data frame output from whichever function you used for the statistical test (nbinomTest or nbinomGLMTest) has a log(fold change) column, the sign of which indicates direction of change.
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