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Old 01-12-2015, 03:13 PM   #3
arkilis
Senior Member
 
Location: Australia

Join Date: Jul 2013
Posts: 119
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Thanks GenoMax again. You helped me on the other question. I might want to find out the all kir genes in a batch of sequence data.

When I go the the ftp site, I found kir_nuc.fasta and many other individual locus sequences (i.e. kir3ds1_nuc.fasta), the kir_nuc.fasta name seems to be an all-in-one sequence file. But when I concatenate all the other locus sequence, which the sequence content is different from kir_nuc.fasta. So if I want to find all kir genes, should I use the kir_nuc.fasta or create a new one which concatenate all single locus sequence together?

Many thanks!
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