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Old 04-25-2011, 03:03 AM   #14
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Location: Halifax, Nova Scotia

Join Date: Mar 2009
Posts: 381

Originally Posted by Chuckytah View Post

I have found this website: but it's for bacteria and archeobacteria...

don't know about one for all the kingdoms?

I have a contigs.fasta and i want to know how many sequences i have from wich taxonomic groups...
The Galaxy web portal has a MegaBlast tool, which will also build trees of your sequences highlighted by taxa. Watch the video tutorial on "Processing and analysis of 454 data in metagenomic studies"
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