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Old 09-03-2012, 12:53 PM   #5
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Location: Sweden

Join Date: Mar 2008
Posts: 324

The data is in BED format with one line per alignment. You can upload it to UCSC as a BED file but to get it in wiggle format you need to use some type of peak finder. There are online tools that can use the SRA URL, I know accepts BED file and can produce wiggle files using the MACS peak finder.
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