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Old 06-14-2010, 11:49 AM   #4
Nils Homer
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Location: Boston, MA, USA

Join Date: Nov 2008
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Originally Posted by Bio.X2Y View Post
Thanks mrawlins! I'm leaning towards that interpretation too.

I'm trying to get a definitive stance since I'm in the process of writing some code that supports sam, and I'd prefer not to add another non-compliant application to the mix!

Anybody have something conclusive?
Thanks for your time
Since the spec. is ambiguous in this case, and it probably should not be, could you send your email to the samtools help list ( I think the spec. could benefit from this question.
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