SEQanswers - View Single Post - problem with tophat commnd directing bowtie indexes

Bio.X2Y · 06-16-2010, 03:57 AM

As far as I know you don't create a subdirectory for each index. just place the 6 hg18 files in the indexes directory.

06-16-2010, 03:57 AM	#2
Bio.X2Y Member Location: Europe Join Date: Apr 2010 Posts: 46	As far as I know you don't create a subdirectory for each index. just place the 6 hg18 files in the indexes directory.