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Old 08-24-2010, 07:55 AM   #5
jjw14
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Location: Missouri

Join Date: Apr 2010
Posts: 39
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Thanks very much. Your description of the "independent peaks" or peak "frequency" for MeDIP versus ChIP is exactly the type information I was interested in.

I'm using MACS for peak detection. Do you feel there is a more appropriate algorithm for MeDIP peak detection, especially for the areas of low enrichment you describe?

Much appreciated,
jjw
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