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Old 04-30-2012, 12:48 AM   #1
Location: bangalore,india

Join Date: Jul 2011
Posts: 41
Default How To make mapping density of bowtie alignments

Hi all,

I have aligned the RNA-Seq reads generated in the lab to the transcriptome available using bowtie1. I want to make the wiggle tracks or mapping density of the reads to each contig. So that i can visualize the the alignment..
Please help. Badly need assistance.

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